Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888188.1_cds_XP_016442737.1_37965
CDS Infomation

[gene=LOC107768148] [db_xref=GeneID:107768148] [protein=probable xyloglucan galactosyltransferase GT17] [protein_id=XP_016442737.1] [location=53205..54611] [gbkey=CDS]
Sequence

ATGTGGCGAAAAATTCATTTCAAAATTTTTACAAAGGAGAAAGATGAAGAATACGGATTA
AGAAAGAAAGAATTTACTTCTCTGAAAGAAATTCAACCCCATTTGAAAATCCTTGTTCTT
TTTACAACTTCCTTCATGATTTGGTTTCTTTTTCTCCTAGTTTTTTCACCCAAAAGAATA
TCGAATCCCATCCGAGGATTCCTCTCAACTCATTCTCCAGCAGAATGCAGAGACAATTAC
TCTGTCTATATTTACAACCTGCCTTCCAAATTTAATTTTGATCTGTTGGAAGATTGTAGC
AGTTTGAATATCTACACAGATATGTGCCCTCATGTTACAAATAATGGCATGGGAAAGCCA
CTCCCTGAAATGGGCTCTAGCAGCTGGTACACCACTCATCAACTCATCGGTGAATTAATC
GTTCATGCTCGAATCGAAAACCACCCCTGTCGTACAGAGAATGCAGAGAAAGCGACTCTG
TTTTATGTACCTTTCTACGGGGGGCTCCATGCCTCGAGCAAATTTCGCGAGCCAAATTAC
ACGATTCGTGATGCATTGGCTGTTGAATTGGTGGAGTATATAGAAGAGCAGAAGTGGTGG
AAGAGGAATAATGGGAGAGACCGTTTCATGGCTTTTGGAAGAACTGCTTGGGATTTCATG
AGGACTGATGAAGTTCCTGATTTTGGTGCAAACAAGTTATTGAACATGTCCCCTGTGCAG
AATATGTCTGTTCTTTTGGTGGAAAGACACCCTTGGGAAGGCCATAATCAACATGGCATT
CCTTACCCCTCCTACTTCCATCCCTCTGCATTGTCTGAGATGATTGAATGGCAAGATCGT
GTGAGTTATATGGATAGGCCTCATTTGTTTTCGTTTGTTGGGGCTCCCCGGACAGGAAAG
AAAAAAGTTGTCACAAGGGACAGAGTCATAAAACAGTGCGAGGAGTCAAGTAAGTGCTTG
ATCTTGAAATGTGGCAAGGGACCAAGTAAGTGTCACAAGCCTAGACAAGTTCTTAACGTG
ATGATGAGGTCCAATTTTTGCTTGCAAGTGTTGGGCGATTCATATACTCGACGCTCAACT
TTTGATTCCATACTTACTGGATGTATTCCGGTCTTCTTTTCTAACCATACCGCATATTCG
CAATACCAATGGTTTTTACCTTCTGATCCTACCACATATTCCGTTTACATTGATTTAGAA
CGAAACCATAGCATAGGAATAGAGGAAGAGCTTCTCAAAATTCCAATGGAAGAAGTAGAA
AGAAAGAGGAGGACTGTCATAGAATTGATCCCAAAATTAACGTATGCAAACCCTAATTCT
ACTTCATATGGATTTAGGGATGCTGTTGATGTCGCCCTTAAAGCACTGTCCGATCACGTT
AGCTCATTGTTAAAAGCTACCTCTTGA

Peptide Sequence

PEP ID

XP_016442737.1
PEP Infomation

PREDICTED: probable xyloglucan galactosyltransferase GT17 [Nicotiana tabacum]
Sequence

MWRKIHFKIFTKEKDEEYGLRKKEFTSLKEIQPHLKILVLFTTSFMIWFLFLLVFSPKRI
SNPIRGFLSTHSPAECRDNYSVYIYNLPSKFNFDLLEDCSSLNIYTDMCPHVTNNGMGKP
LPEMGSSSWYTTHQLIGELIVHARIENHPCRTENAEKATLFYVPFYGGLHASSKFREPNY
TIRDALAVELVEYIEEQKWWKRNNGRDRFMAFGRTAWDFMRTDEVPDFGANKLLNMSPVQ
NMSVLLVERHPWEGHNQHGIPYPSYFHPSALSEMIEWQDRVSYMDRPHLFSFVGAPRTGK
KKVVTRDRVIKQCEESSKCLILKCGKGPSKCHKPRQVLNVMMRSNFCLQVLGDSYTRRST
FDSILTGCIPVFFSNHTAYSQYQWFLPSDPTTYSVYIDLERNHSIGIEEELLKIPMEEVE
RKRRTVIELIPKLTYANPNSTSYGFRDAVDVALKALSDHVSSLLKATS

Transcript Sequence

Gene sequence data has not been registered.